TDM GMS Browse 5.5

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TDM GMS Browse describes all the features of the latest version.

Changes to BROWSE from 5.4 to 5.5

  • 5.5.2.0 ----------------------------------------------------------------
  • 09/07/10 Added option NMSTD to supress name standardization (NMSTD=1)
  • 5.5.1.6 ----------------------------------------------------------------
  • 21/05/10 Added default REFID to all GMS_addChanges Calls
  • .SET fld=xx IN nn description
  •    where
  •    xx and nn have the same definition as before
  •    description is text which is assigned to field CHANGES.CDESC
  • In addition, if you use the .OPT REFID=n command then CHANGES.CREF will be
  • filled with n for all changes until the next .OPT REFID command.
  • 5.5.1.5 ----------------------------------------------------------------
  • 13/02/10 Increased field width for printing GIDs to 9 characters.
  • 12/11/09 INCREASED FIELDWIDTH FOR GID IN FORMAT 116
  • 12/11/09 Had to change the file type of .r*files to "Resource Script"
  • before Visual studio would recognize the resource file.
  • 5.5.1.3 ------------------------------------------------------------------
  • 20/10/08
  • Changes: Modified COP to assign 1 for inbreeding coefficient of DH lines
  • ADDED COMPONENTS %ORDER AND %EXORD TO THE GMS_TREE DATA
  • STRUCTURE TO STORE THE CROSS ORDER AND THE EXTRACTION ORDER
  • OF TREE ELEMENTS RESPECIVELY. CHANGED DIMENSION OF GTREE,
  • ITREE AND RTREE TO ACCOMODATE THE NEW STRUCTURE.
  • MODIFIED FUNCTION COP TO CHECK %METHOD FOR DH METHOD
  • WHEN COMPUTING INBREEDING COEFFICIENT OF LINES AND
  • ASSIGN 1 WHEN FOUND.
  • CLEANED UP SUBROUTINE LCOPI TO USE THE NEW TRREE STRUCTURE
  • WHEN OUTPUTING A TREE IN OFFSPRING, SIRE, DAM FORMAT.
  • 5.5.1.2 ----------------------------------------------------------------
  • 29/06/08 Increased output field width for LISTID in SUBROUTINE SEARCHLISTS
  • 29/06/08 Increased size of LISTDATA.SOURCE to 256
  • 5.5.1.1 ----------------------------------------------------------------
  • 09/05/08 MODIFIED DEFAULTS FOR INBREEDING IN COP CALCULATIONS
  • CHANGED OPTION FLAG BTYPE FROM REAL TO INTEGER WITH VALUES:
  • BTYPE=1 FOR SF CROPS ASSUMING FULL INBREEDING FOR LINES WITH UNKNOWN SOURCE
  • BTYPE=2 FOR SF CROPS ASSUMING F4 FOR LINES WITH UNKNOWN SOURCE BUT KNOWN PARENTS
  • BTYPE=0 FOR CF CROPS
  • 5.4.2.11 ---------------------------------------------------------------
  • 09/05/08 Increased dimension of UDFLDS buffer (UDFNO and UDFCD)
  • 5.4.2.10 ----------------------------------------------------------------
  • 24/04/08 INCREASED LENGTH OF NAME VARIABLES FROM 80 TO 256 TO CATER FOR
  • MAIZE PEDIGREES. INCREASED VARIABLE SIZE IN NAMLST AND FCROSS1,
  • BUT NOT IN NAMLST1 WHICH IS ONLY CALLED FROM ADDCROSS WHICH IS
  • NOT USED AT ALL AT THE MOMENT.
  • 24/04/08 Added NUID to output of NAMES in WRTGERM.
  • 5.4.2.7 ----------------------------------------------------------------
  • 18/04/08 A list of initial option settings is now printed to the log file
  • and missing fields from the germplasm details have been added to
  • the log file. Some change error messages have been logged, but those
  • requiring an interactive response are not logged.
  • 18/04/08 SETGPID2 CHANGED TO DETECT CREATION OF ONE-STEP CIRCULARITIES
  • 5.4.2.6 ----------------------------------------------------------------
  • 15/04/08 FIXED SOME SPACE BUGS IN SEARCHLISTS AND ADDED ERROR DIAGNOSTICS
  • REMOVED AUTOMATI*LIST SEARCH FROM WRITEGERM SO USER MUST USE .SLS
  • 5.4.2.4 ----------------------------------------------------------------
  • 21/02/08 ADDED COMMAND .ICP LST <LVL> TO EXPORT THE TREE FOR A LIST
  • USING OFFSPRING DAM SIRE FORMAT.
  • 11/02/08 Added argument LVL to commands .COP LSt and .EXT LST so that
  • .EXT LST <lvl> will extract the combined pedigree tree for the
  • open list up to lvl generative generations only and
  • .COP LST <lvl> computes the COP matrix using pedigrees over
  • the last lvl generative generations only.
  • This involved setting GADDR to 0 in ancestors with incomplete
  • pedigree expansion at line 25-2 in SUBROUTINE LCOP and skipping
  • the computation of coefficient of inbreeding for non expanded
  • common group sources at line 5-5 in FUNCTION COP.
  • 5.4.2.2 ----------------------------------------------------------------
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